Christoph Budziszewski commited on 2009-04-26 02:36:45
Zeige 1 geänderte Dateien mit 11 Einfügungen und 5 Löschungen.
git-svn-id: https://svn.discofish.de/MATLAB/spmtoolbox/SVMCrossVal@183 83ab2cfd-5345-466c-8aeb-2b2739fb922d
| ... | ... |
@@ -101,6 +101,7 @@ for s = 1:nSubjects |
| 101 | 101 |
warning(warn); |
| 102 | 102 |
clear extr; |
| 103 | 103 |
%run searchlight |
| 104 |
+ pause(0.001) % flush system event queue (respond to ctrl-c) |
|
| 104 | 105 |
tic |
| 105 | 106 |
|
| 106 | 107 |
display(sprintf('rastering %g coordinates with approx. %g mm radius',nVoxel,radius));
|
| ... | ... |
@@ -129,13 +130,15 @@ for s = 1:nSubjects |
| 129 | 130 |
|
| 130 | 131 |
nSamplePoints = ((timeLineEnd-timeLineStart)/res) +1; |
| 131 | 132 |
|
| 132 |
-if ~isempty( fbsargs.timeline ) |
|
| 133 |
- timeShiftIdx = fbsargs.timeline; |
|
| 133 |
+if isempty( fbsargs.timeline ) |
|
| 134 |
+ fbsTimeLine = 1:nSamplePoints |
|
| 134 | 135 |
else |
| 135 |
- timeShiftIdx = 1:nSamplePoints; |
|
| 136 |
+ fbsTimeLine = fbsargs.timeline |
|
| 136 | 137 |
end |
| 137 | 138 |
|
| 138 |
- for timeShiftIdx |
|
| 139 |
+ |
|
| 140 |
+ for timeShiftIdx = fbsTimeLine |
|
| 141 |
+ |
|
| 139 | 142 |
% center timepoint && relative shift |
| 140 | 143 |
frameStartIdx = floor(-globalStart+1+timeShiftIdx - 0.5*decodeDuration); |
| 141 | 144 |
frameEndIdx = min(ceil(frameStartIdx+decodeDuration + 0.5*decodeDuration),-globalStart+globalEnd); |
| ... | ... |
@@ -143,6 +146,10 @@ end |
| 143 | 146 |
img3D = zeros(size(mask_image)); %output image prepare |
| 144 | 147 |
|
| 145 | 148 |
for iVoxel = 1:nVoxel % linear structure avoids 3D-Loop. |
| 149 |
+ if (mod(iVoxel,100)== 0) |
|
| 150 |
+ display(sprintf('Status: %03u / %03u Timepoints, %05u / %05u Coordinates',timeShiftIdx,nSamplePoints,iVoxel,nVoxel));
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|
| 151 |
+ pause(0.001) %flush system event queue |
|
| 152 |
+ end |
|
| 146 | 153 |
% get surrounding coordinate-IDs within radius |
| 147 | 154 |
sphere = fbs_buildSphere(mapping,iVoxel,radius,vdim); |
| 148 | 155 |
|
| ... | ... |
@@ -177,7 +184,6 @@ end |
| 177 | 184 |
|
| 178 | 185 |
img3D(x,y,z) = ((decode/100)-0.5)*2; % range [-1:1] |
| 179 | 186 |
|
| 180 |
- display(sprintf('Status: %03u / %03u Timepoints, %05u / %05u Coordinates',timeShiftIdx,nSamplePoints,iVoxel,nVoxel));
|
|
| 181 | 187 |
end %for each voxel |
| 182 | 188 |
|
| 183 | 189 |
nii = make_nii(img3D,vdim,mask_image.hdr.hist.originator(1:3),16,... |
| 184 | 190 |