Add bitseq function in tests for more readable notation
Marco Ricci commited on 2024-07-22 13:23:35
Zeige 1 geänderte Dateien mit 8 Einfügungen und 52 Löschungen.
- tests/test_sequin.py d810fb9..a3cfee3
| ... | ... |
@@ -11,6 +11,11 @@ import pytest |
| 11 | 11 |
import sequin |
| 12 | 12 |
|
| 13 | 13 |
|
| 14 |
+def bitseq(string: str) -> list[int]: |
|
| 15 |
+ """Convert a 0/1-string into a list of bits.""" |
|
| 16 |
+ return [int(char, 2) for char in string] |
|
| 17 |
+ |
|
| 18 |
+ |
|
| 14 | 19 |
class TestStaticFunctionality: |
| 15 | 20 |
@pytest.mark.parametrize( |
| 16 | 21 |
['sequence', 'base', 'expected'], |
| ... | ... |
@@ -49,60 +54,11 @@ class TestSequin: |
| 49 | 54 |
( |
| 50 | 55 |
[1, 0, 0, 1, 0, 1], |
| 51 | 56 |
False, |
| 52 |
- [ |
|
| 53 |
- 0, |
|
| 54 |
- 0, |
|
| 55 |
- 0, |
|
| 56 |
- 0, |
|
| 57 |
- 0, |
|
| 58 |
- 0, |
|
| 59 |
- 0, |
|
| 60 |
- 1, |
|
| 61 |
- 0, |
|
| 62 |
- 0, |
|
| 63 |
- 0, |
|
| 64 |
- 0, |
|
| 65 |
- 0, |
|
| 66 |
- 0, |
|
| 67 |
- 0, |
|
| 68 |
- 0, |
|
| 69 |
- 0, |
|
| 70 |
- 0, |
|
| 71 |
- 0, |
|
| 72 |
- 0, |
|
| 73 |
- 0, |
|
| 74 |
- 0, |
|
| 75 |
- 0, |
|
| 76 |
- 0, |
|
| 77 |
- 0, |
|
| 78 |
- 0, |
|
| 79 |
- 0, |
|
| 80 |
- 0, |
|
| 81 |
- 0, |
|
| 82 |
- 0, |
|
| 83 |
- 0, |
|
| 84 |
- 1, |
|
| 85 |
- 0, |
|
| 86 |
- 0, |
|
| 87 |
- 0, |
|
| 88 |
- 0, |
|
| 89 |
- 0, |
|
| 90 |
- 0, |
|
| 91 |
- 0, |
|
| 92 |
- 0, |
|
| 93 |
- 0, |
|
| 94 |
- 0, |
|
| 95 |
- 0, |
|
| 96 |
- 0, |
|
| 97 |
- 0, |
|
| 98 |
- 0, |
|
| 99 |
- 0, |
|
| 100 |
- 1, |
|
| 101 |
- ], |
|
| 57 |
+ bitseq('000000010000000000000000000000010000000000000001'),
|
|
| 102 | 58 |
), |
| 103 | 59 |
([1, 0, 0, 1, 0, 1], True, [1, 0, 0, 1, 0, 1]), |
| 104 |
- (b'OK', False, [0, 1, 0, 0, 1, 1, 1, 1, 0, 1, 0, 0, 1, 0, 1, 1]), |
|
| 105 |
- ('OK', False, [0, 1, 0, 0, 1, 1, 1, 1, 0, 1, 0, 0, 1, 0, 1, 1]),
|
|
| 60 |
+ (b'OK', False, bitseq('0100111101001011')),
|
|
| 61 |
+ ('OK', False, bitseq('0100111101001011')),
|
|
| 106 | 62 |
], |
| 107 | 63 |
) |
| 108 | 64 |
def test_200_constructor(self, sequence, is_bitstring, expected): |
| 109 | 65 |